drwxr-xr-x root/root 0 2025-04-21 12:58 ./ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/bin/ -rwxr-xr-x root/root 212 2025-04-21 12:58 ./usr/bin/coot -rwxr-xr-x root/root 19040 2025-04-21 12:58 ./usr/bin/coot-bfactan -rwxr-xr-x root/root 3196 2025-04-21 12:58 ./usr/bin/coot-density-score-by-residue -rwxr-xr-x root/root 2884 2025-04-21 12:58 ./usr/bin/coot-findligand -rwxr-xr-x root/root 2882 2025-04-21 12:58 ./usr/bin/coot-findwaters -rwxr-xr-x root/root 2002 2025-04-21 12:58 ./usr/bin/coot-identify-protein -rwxr-xr-x root/root 1230 2025-04-21 12:58 ./usr/bin/coot-ligand-validation -rwxr-xr-x root/root 1216 2025-04-21 12:58 ./usr/bin/coot-mini-rsr -rwxr-xr-x root/root 23192 2025-04-21 12:58 ./usr/bin/coot-mmrrcc -rwxr-xr-x root/root 76 2025-04-21 12:58 ./usr/bin/layla -rwxr-xr-x root/root 861 2025-04-21 12:58 ./usr/bin/pyrogen drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/python3/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/python3/dist-packages/ -rw-r--r-- root/root 2457816 2025-04-21 12:58 ./usr/lib/python3/dist-packages/_coot.cpython-313-x86_64-linux-gnu.so -rw-r--r-- root/root 1204536 2025-04-21 12:58 ./usr/lib/python3/dist-packages/_coot_headless_api.cpython-313-x86_64-linux-gnu.so -rw-r--r-- root/root 503832 2025-04-21 12:58 ./usr/lib/python3/dist-packages/_pyrogen_swig.cpython-313-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/ -rw-r--r-- root/root 20661 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/add_linked_cho.py -rw-r--r-- root/root 1210 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/americanisms.py -rw-r--r-- root/root 34622 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/atom_types.py -rw-r--r-- root/root 2178 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/background_demo.py -rw-r--r-- root/root 6048 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/bones_reader.py -rw-r--r-- root/root 2002 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/brute_lsqman.py -rw-r--r-- root/root 16025 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/check_for_updates.py -rw-r--r-- root/root 6516 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/cho_restraints_from_models.py -rw-r--r-- root/root 7737 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/clear_backup.py -rw-r--r-- root/root 6847 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/cns2coot.py -rw-r--r-- root/root 14284 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_acedrg_link.py -rw-r--r-- root/root 28901 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_chemical_feature_clusters.py -rw-r--r-- root/root 3800 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_contact_score_isolated_ligand.py -rw-r--r-- root/root 17661 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_find_baddies.py -rw-r--r-- root/root 34377 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_fitting.py -rw-r--r-- root/root 31762 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_generator_3d_import.py -rw-r--r-- root/root 38 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_git.py -rw-r--r-- root/root 248279 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_gui.py -rw-r--r-- root/root 5095 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_hole.py -rw-r--r-- root/root 13047 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_ligand_check.py -rw-r--r-- root/root 4549 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_load_modules.py -rw-r--r-- root/root 3463 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_lsq.py -rw-r--r-- root/root 13661 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_ncs.py -rw-r--r-- root/root 8197 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_output_to_window.py -rw-r--r-- root/root 13343 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_redefine_functions.py -rw-r--r-- root/root 919 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_res_spec_utils.py -rw-r--r-- root/root 5335 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_sharpen_blur.py -rw-r--r-- root/root 10419 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_testing_utils.py -rw-r--r-- root/root 31613 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_toolbuttons.py -rw-r--r-- root/root 156604 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/coot_utils.py -rw-r--r-- root/root 1755 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/create_server.py -rw-r--r-- root/root 2066 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/dictionary_generators.py -rw-r--r-- root/root 10103 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/enhanced_ligand.py -rw-r--r-- root/root 2361 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/extensions.py -rw-r--r-- root/root 1230 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/filter.py -rw-r--r-- root/root 14116 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/gap.py -rw-r--r-- root/root 22438 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/generic_objects.py -rw-r--r-- root/root 15895 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/get_ebi.py -rw-r--r-- root/root 43397 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/get_recent_pdbe.py -rw-r--r-- root/root 1547 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/group_settings.py -rw-r--r-- root/root 36757 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/gui_add_linked_cho.py -rw-r--r-- root/root 739 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/gui_contact_score_isolated_ligand.py -rw-r--r-- root/root 3450 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/gui_hole.py -rw-r--r-- root/root 5527 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/gui_ligand_sliders.py -rw-r--r-- root/root 11565 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/gui_prosmart.py -rw-r--r-- root/root 2640 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/hello.py -rw-r--r-- root/root 3485 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/interactive_nudge_residues.py -rw-r--r-- root/root 582 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/jay_util.py -rw-r--r-- root/root 8881 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/jligand.py -rw-r--r-- root/root 4738 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/jligand_gui.py -rw-r--r-- root/root 10656 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/libcheck.py -rw-r--r-- root/root 11993 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/ligand_validation_sliders.py -rw-r--r-- root/root 191 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/local_code.py -rw-r--r-- root/root 11154 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/mutate.py -rw-r--r-- root/root 28188 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/parse_pisa_xml.py -rw-r--r-- root/root 3049 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/pathology_plots.py -rw-r--r-- root/root 34965 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/pdbe_validation_data.py -rw-r--r-- root/root 52228 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/populate_python_menus.py -rw-r--r-- root/root 3036 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/povray.py -rw-r--r-- root/root 50105 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/pyrogen.py -rw-r--r-- root/root 13881 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/pyrogen_swig.py -rw-r--r-- root/root 4361 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/python_coot_docs.py -rw-r--r-- root/root 10725 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/raster3d.py -rw-r--r-- root/root 2865 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/rcrane_loader.py -rw-r--r-- root/root 2509 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/refine.py -rw-r--r-- root/root 69328 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/refmac.py -rw-r--r-- root/root 8673 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/remote_control.py -rw-r--r-- root/root 8 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/run_mogul.py -rw-r--r-- root/root 26477 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/shelx.py -rw-r--r-- root/root 9624 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/shelx_extensions.py -rw-r--r-- root/root 25154 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/tautomer.py -rw-r--r-- root/root 8032 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/template_key_bindings.py -rw-r--r-- root/root 4275 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/tips.py -rw-r--r-- root/root 3474 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/tips_gui.py -rw-r--r-- root/root 22486 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/user_define_restraints.py -rw-r--r-- root/root 12312 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot/what_check.py -rwxr-xr-x root/root 17 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot.pth -rwxr-xr-x root/root 545238 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot.py -rw-r--r-- root/root 706080 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot_headless_api.cpython-313-x86_64-linux-gnu.so -rw-r--r-- root/root 131686 2025-04-21 12:58 ./usr/lib/python3/dist-packages/coot_headless_api.py -rw-r--r-- root/root 227208 2025-04-21 12:58 ./usr/lib/python3/dist-packages/pyrogen_boost.cpython-313-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/ -rw-r--r-- root/root 711896 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libMoleculesToTrianglesCXXClasses.so.0.0.0 -rw-r--r-- root/root 610464 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libMoleculesToTrianglesCXXSurface.so.0.0.0 -rw-r--r-- root/root 237736 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libccp4mg-utils.so.0.0.0 -rw-r--r-- root/root 121768 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-AngleInfo.so.0.0.0 -rw-r--r-- root/root 324144 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-analysis.so.0.0.0 -rw-r--r-- root/root 2100000 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-api.so.0.0.0 -rw-r--r-- root/root 31104 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-cabuild.so.0.0.0 -rw-r--r-- root/root 18560 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-compat.so.0.0.0 -rw-r--r-- root/root 456048 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coord-extras.so.0.0.0 -rw-r--r-- root/root 3322752 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coord-utils.so.0.0.0 -rw-r--r-- root/root 513720 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coords.so.0.0.0 -rw-r--r-- root/root 146928 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-db-main.so.0.0.0 -rw-r--r-- root/root 1129816 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-geometry.so.0.0.0 -rw-r--r-- root/root 208840 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-high-res.so.0.0.0 -rw-r--r-- root/root 1511768 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-ideal.so.0.0.0 -rw-r--r-- root/root 118000 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-isosurface.so.0.0.0 -rw-r--r-- root/root 569784 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-layla.so.0.0.0 -rw-r--r-- root/root 772512 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-lidia-core.so.0.0.0 -rw-r--r-- root/root 1764384 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-ligand.so.0.0.0 -rw-r--r-- root/root 130568 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-map-heavy.so.0.0.0 -rw-r--r-- root/root 604088 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-map-utils.so.0.0.0 -rw-r--r-- root/root 154976 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-mini-mol.so.0.0.0 -rw-r--r-- root/root 517640 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-pli.so.0.0.0 -rw-r--r-- root/root 81112 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-protein-db.so.0.0.0 -rw-r--r-- root/root 459976 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-res-tracer.so.0.0.0 -rw-r--r-- root/root 142704 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-skeleton.so.0.0.0 -rw-r--r-- root/root 232952 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-utils.so.0.0.0 -rw-r--r-- root/root 64504 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-validation-graphs.so.0.0.0 -rw-r--r-- root/root 336320 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot_py_restraints.so.0.0.0 -rw-r--r-- root/root 171664 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootaneer.so.0.0.0 -rw-r--r-- root/root 196240 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootilus.so.0.0.0 -rw-r--r-- root/root 8589248 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootsumo.so.0.0.0 drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/pkgconfig/ -rw-r--r-- root/root 334 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/pkgconfig/MoleculesToTrianglesCXXClasses.pc drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/libexec/ -rwxr-xr-x root/root 702208 2025-04-21 12:58 ./usr/libexec/coot-1 -rwxr-xr-x root/root 40136 2025-04-21 12:58 ./usr/libexec/coot-density-score-by-residue-bin -rwxr-xr-x root/root 102296 2025-04-21 12:58 ./usr/libexec/coot-findligand-bin -rwxr-xr-x root/root 40320 2025-04-21 12:58 ./usr/libexec/coot-findwaters-bin -rwxr-xr-x root/root 27368 2025-04-21 12:58 ./usr/libexec/coot-identify-protein-bin -rwxr-xr-x root/root 68624 2025-04-21 12:58 ./usr/libexec/coot-ligand-validation-bin -rwxr-xr-x root/root 19000 2025-04-21 12:58 ./usr/libexec/coot-make-ligands-db -rwxr-xr-x root/root 23264 2025-04-21 12:58 ./usr/libexec/layla -rwxr-xr-x root/root 148120 2025-04-21 12:58 ./usr/libexec/mini-rsr-bin drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/applications/ -rw-r--r-- root/root 300 2025-04-21 12:58 ./usr/share/applications/coot.desktop drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/doc/coot/ -rw-r--r-- root/root 41846 2025-03-31 00:33 ./usr/share/doc/coot/RELEASE-NOTES.gz -rw-r--r-- root/root 226 2025-04-21 12:58 ./usr/share/doc/coot/changelog.Debian.amd64.gz -rw-r--r-- root/root 1135 2025-04-21 12:58 ./usr/share/doc/coot/changelog.Debian.gz -rw-r--r-- root/root 57191 2025-03-31 00:33 ./usr/share/doc/coot/changelog.gz -rw-r--r-- root/root 116977 2025-04-02 11:42 ./usr/share/doc/coot/copyright drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/22x22/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/22x22/apps/ -rw-r--r-- root/root 3481 2025-04-21 12:58 ./usr/share/icons/hicolor/22x22/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/24x24/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/24x24/apps/ -rw-r--r-- root/root 3687 2025-04-21 12:58 ./usr/share/icons/hicolor/24x24/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/256x256/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/256x256/apps/ -rw-r--r-- root/root 49370 2025-04-21 12:58 ./usr/share/icons/hicolor/256x256/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/32x32/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/32x32/apps/ -rw-r--r-- root/root 4570 2025-04-21 12:58 ./usr/share/icons/hicolor/32x32/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/48x48/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/48x48/apps/ -rw-r--r-- root/root 6518 2025-04-21 12:58 ./usr/share/icons/hicolor/48x48/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/64x64/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/64x64/apps/ -rw-r--r-- root/root 8476 2025-04-21 12:58 ./usr/share/icons/hicolor/64x64/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/96x96/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/96x96/apps/ -rw-r--r-- root/root 10597 2025-04-21 12:58 ./usr/share/icons/hicolor/96x96/apps/coot.png drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/actions/ -rw-r--r-- root/root 39209 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/actions/Stock-dialog-information.svg -rw-r--r-- root/root 2663 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/actions/Stock-dialog-warning.svg drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/apps/ -rw-r--r-- root/root 18423 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/apps/coot-layla.svg -rw-r--r-- root/root 40949 2025-04-21 12:58 ./usr/share/icons/hicolor/scalable/apps/coot.svg drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/man/ drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/man/man1/ -rw-r--r-- root/root 348 2025-04-21 12:58 ./usr/share/man/man1/coot-available-comp-id.1.gz -rw-r--r-- root/root 178 2025-04-21 12:58 ./usr/share/man/man1/coot-bfactan.1.gz -rw-r--r-- root/root 826 2025-04-21 12:58 ./usr/share/man/man1/coot-compare-dictionaries.1.gz -rw-r--r-- root/root 311 2025-04-21 12:58 ./usr/share/man/man1/coot-density-score-by-residue.1.gz -rw-r--r-- root/root 189 2025-04-21 12:58 ./usr/share/man/man1/coot-fix-nomenclature-errors.1.gz -rw-r--r-- root/root 755 2025-04-21 12:58 ./usr/share/man/man1/coot-identify-protein.1.gz -rw-r--r-- root/root 206 2025-04-21 12:58 ./usr/share/man/man1/coot-make-shelx-restraints.1.gz -rw-r--r-- root/root 1026 2025-04-21 12:58 ./usr/share/man/man1/coot-mini-rsr.1.gz -rw-r--r-- root/root 3058 2025-04-21 12:58 ./usr/share/man/man1/coot.1.gz -rw-r--r-- root/root 655 2025-04-21 12:58 ./usr/share/man/man1/density-score-by-residue.1.gz -rw-r--r-- root/root 1007 2025-04-21 12:58 ./usr/share/man/man1/findligand.1.gz -rw-r--r-- root/root 867 2025-04-21 12:58 ./usr/share/man/man1/findwaters.1.gz -rw-r--r-- root/root 386 2025-04-21 12:58 ./usr/share/man/man1/fix-nomenclature-errors.1.gz -rw-r--r-- root/root 757 2025-04-21 12:58 ./usr/share/man/man1/layla.1.gz -rw-r--r-- root/root 354 2025-04-21 12:58 ./usr/share/man/man1/lidia.1.gz -rw-r--r-- root/root 1551 2025-04-21 12:58 ./usr/share/man/man1/pyrogen.1.gz drwxr-xr-x root/root 0 2025-04-21 12:58 ./usr/share/metainfo/ -rw-r--r-- root/root 10787 2025-04-21 12:58 ./usr/share/metainfo/coot.appdata.xml lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libMoleculesToTrianglesCXXClasses.so -> libMoleculesToTrianglesCXXClasses.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libMoleculesToTrianglesCXXClasses.so.0 -> libMoleculesToTrianglesCXXClasses.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libMoleculesToTrianglesCXXSurface.so -> libMoleculesToTrianglesCXXSurface.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libMoleculesToTrianglesCXXSurface.so.0 -> libMoleculesToTrianglesCXXSurface.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libccp4mg-utils.so -> libccp4mg-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libccp4mg-utils.so.0 -> libccp4mg-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-AngleInfo.so -> libcoot-AngleInfo.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-AngleInfo.so.0 -> libcoot-AngleInfo.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-analysis.so -> libcoot-analysis.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-analysis.so.0 -> libcoot-analysis.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-api.so -> libcoot-api.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-api.so.0 -> libcoot-api.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-cabuild.so -> libcoot-cabuild.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-cabuild.so.0 -> libcoot-cabuild.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-compat.so -> libcoot-compat.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-compat.so.0 -> libcoot-compat.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coord-extras.so -> libcoot-coord-extras.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coord-extras.so.0 -> libcoot-coord-extras.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coord-utils.so -> libcoot-coord-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coord-utils.so.0 -> libcoot-coord-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coords.so -> libcoot-coords.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-coords.so.0 -> libcoot-coords.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-db-main.so -> libcoot-db-main.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-db-main.so.0 -> libcoot-db-main.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-geometry.so -> libcoot-geometry.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-geometry.so.0 -> libcoot-geometry.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-high-res.so -> libcoot-high-res.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-high-res.so.0 -> libcoot-high-res.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-ideal.so -> libcoot-ideal.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-ideal.so.0 -> libcoot-ideal.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-isosurface.so -> libcoot-isosurface.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-isosurface.so.0 -> libcoot-isosurface.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-layla.so -> libcoot-layla.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-layla.so.0 -> libcoot-layla.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-lidia-core.so -> libcoot-lidia-core.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-lidia-core.so.0 -> libcoot-lidia-core.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-ligand.so -> libcoot-ligand.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-ligand.so.0 -> libcoot-ligand.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-map-heavy.so -> libcoot-map-heavy.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-map-heavy.so.0 -> libcoot-map-heavy.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-map-utils.so -> libcoot-map-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-map-utils.so.0 -> libcoot-map-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-mini-mol.so -> libcoot-mini-mol.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-mini-mol.so.0 -> libcoot-mini-mol.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-pli.so -> libcoot-pli.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-pli.so.0 -> libcoot-pli.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-protein-db.so -> libcoot-protein-db.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-protein-db.so.0 -> libcoot-protein-db.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-res-tracer.so -> libcoot-res-tracer.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-res-tracer.so.0 -> libcoot-res-tracer.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-skeleton.so -> libcoot-skeleton.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-skeleton.so.0 -> libcoot-skeleton.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-utils.so -> libcoot-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-utils.so.0 -> libcoot-utils.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-validation-graphs.so -> libcoot-validation-graphs.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot-validation-graphs.so.0 -> libcoot-validation-graphs.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot_py_restraints.so -> libcoot_py_restraints.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcoot_py_restraints.so.0 -> libcoot_py_restraints.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootaneer.so -> libcootaneer.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootaneer.so.0 -> libcootaneer.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootilus.so -> libcootilus.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootilus.so.0 -> libcootilus.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootsumo.so -> libcootsumo.so.0.0.0 lrwxrwxrwx root/root 0 2025-04-21 12:58 ./usr/lib/x86_64-linux-gnu/coot/libcootsumo.so.0 -> libcootsumo.so.0.0.0